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Table 2 Summary of differentially expressed transcription factor (TF) encoding genes compared between two cultivars and different callus states

From: Comparative transcriptome study provides insights into acquisition of embryogenic ability in upland cotton during somatic embryogenesis

Sample type pair

Differentially expressed TF encoding genes

Up-regulated TF encoding genes

Down-regulated TF encoding genes

AN vs AE

257

132

125

BN vs BE

181

52

129