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Table 3 Distribution of genes of the 12 largest domains within Chromosome D502 and Chr D507 with the highest segregation distortion regions (SDRs) in the consensus map combing the genotypic data of the G. klotzschianum and G. davidsonii (Map A) and G. thurberi and G. trilobum (Map B)

From: Genetic map construction and functional characterization of genes within the segregation distortion regions (SDRs) in the F2:3 populations derived from wild cotton species of the D genome

PF number

Domain

D502 Gene number

D507 Gene number

Total genes per domain

PF00069

Protein kinase domain

71

117

188

PF13855

LRR_8; Leucine rich repeat

52

78

130

PF07714

Protein tyrosine kinase domain

55

53

108

PF00931

NB-ARC domain

15

82

97

PF08263

LRRNT_2; Leucine rich repeat N-terminal domain

31

58

89

PF00560

LRR_1; Leucine Rich Repeat

24

61

85

PF01535

Pentatricopeptide repeat (PPR)

26

51

77

PF13041

Pentatricopeptide repeat (PPR_2) repeat family

26

49

75

PF00067

Cytochromes P450 (CYPs)

29

32

61

PF00249

Myb-like DNA-binding domain

15

41

56

PF00076

RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

25

29

54

PF13639

zf-RING_2; Ring finger domain

15

36

51

Total

 

384

687

1 071