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Table 3 Distribution of genes of the 12 largest domains within Chromosome D502 and Chr D507 with the highest segregation distortion regions (SDRs) in the consensus map combing the genotypic data of the G. klotzschianum and G. davidsonii (Map A) and G. thurberi and G. trilobum (Map B)

From: Genetic map construction and functional characterization of genes within the segregation distortion regions (SDRs) in the F2:3 populations derived from wild cotton species of the D genome

PF number Domain D502 Gene number D507 Gene number Total genes per domain
PF00069 Protein kinase domain 71 117 188
PF13855 LRR_8; Leucine rich repeat 52 78 130
PF07714 Protein tyrosine kinase domain 55 53 108
PF00931 NB-ARC domain 15 82 97
PF08263 LRRNT_2; Leucine rich repeat N-terminal domain 31 58 89
PF00560 LRR_1; Leucine Rich Repeat 24 61 85
PF01535 Pentatricopeptide repeat (PPR) 26 51 77
PF13041 Pentatricopeptide repeat (PPR_2) repeat family 26 49 75
PF00067 Cytochromes P450 (CYPs) 29 32 61
PF00249 Myb-like DNA-binding domain 15 41 56
PF00076 RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 25 29 54
PF13639 zf-RING_2; Ring finger domain 15 36 51
Total   384 687 1 071