Table 3 The stable QTLs for agronomic traits identified by the composite intervalmapping (CIM) in multiple environments
From: QTL mapping for plant height and fruit branch number based on RIL population of upland cotton
Trait | QTL | Environment | Position /cM | Marker Interval | LOD | Additive | R2/% | Physical interval /Mb | Genes number | Reported previously |
|---|---|---|---|---|---|---|---|---|---|---|
PH | qPH-c03–1 | 16ay | 49.21 | TM6645-TM6845 | 2.51 | 2.35 | 4.53 | 15.21–77.91 | 503 | Said et al. 2013 |
13qz | 50.71 | 2.65 | 1.49 | 4.98 | ||||||
qPH-c04–1 | 15ay | 4.01 | TM9846-TM9831 | 2.17 | −1.67 | 3.97 | 60.53–60.81 | 26 | ||
16ay | 4.01 | 2.26 | −1.74 | 4.11 | ||||||
qPH-c04–3 | 13qz | 32.91 | TM9589-TM9576 | 3.4 | 2.13 | 6.84 | 52.11–54.03 | 46 | ||
13ay | 36.31 | 2.79 | 1.75 | 5.43 | ||||||
qPH-c17–1 | 13ay | 0.11 | TM53503-TM53577 | 3.03 | −1.99 | 5.82 | 2.47–3.73 | 88 | Zhang et al. 2019a | |
14kel | 4.61 | 2 | −1.38 | 3.89 | ||||||
qPH-c19–1 | 15ay | 17.21 | DPL0022-CGR5590 | 3.74 | 1.85 | 7.17 | 3.87–5.71 | 218 | Su et al. 2018 | |
16ay | 20.21 | 4.89 | 2.27 | 8.54 | ||||||
14kel | 20.91 | 4.4 | 1.96 | 8.24 | ||||||
qPH-c25–1 | 14kel | 6.81 | TM58955-TM58998 | 3.09 | 1.44 | 5.77 | 1.27–1.70 | 44 | ||
16ay | 7.51 | 3.79 | 2.02 | 7.11 | ||||||
FBN | qFBN-c14–1 | 14kel | 56.61 | TM52927-TM52567 | 2.43 | 0.25 | 6.23 | 56–60.31 | 156 | |
14ay | 61.61 | 3.16 | 0.73 | 8.49 | ||||||
qFBN-c18–2 | 13qz | 34.71 | TM80422-TM80570 | 1.7 | 0.18 | 3.29 | 7.79–15.74 | 281 | ||
14ay | 38.41 | 2.17 | 0.41 | 4.32 | ||||||
15ay | 38.41 | 2.65 | 0.2 | 5.25 |