Fig. 5

Identification of GhFLA9 on chromosome A12. a Local Manhattan plot (top) and heat map (bottom) surrounding the peak on chromosome A12. Black arrows indicate the positions of the significant SNP i41990Gh. b Box plot for micronaire based on two haplotypes of i41990Gh. n indicates the number of accessions with the same genotype. * indicates significant differences at P = 0.05