Skip to main content

Advertisement

Table 2 Physicochemical Properties of OSCA Gene

From: Genome-wide identification of OSCA gene family and their potential function in the regulation of dehydration and salt stress in Gossypium hirsutum

Gene ID Gene name Chro. No Gene length/bp CDS length/bp No. of amino acids/aa MW (kDa) pI GRAVY Subcellular localization TM
Gh_A01G1022 GhOSCA2.4 Ah01 7 612 2 427 808 91 824.27 9.12 0.155 Plasma membrane, 9
Gh_A05G1223 GhOSCA3.1 Ah05 3 281 2 178 725 82 096.29 9.22 0.292 Plasma membrane 10
Gh_A05G1480 GhOSCA1.1 Ah05 3 655 2 313 770 87 946.96 9.2 0.162 Plasma membrane 10
Gh_A05G1853 GhOSCA2.6 Ah05 5 707 2 235 744 85 367.08 9.36 0.213 Nucleus 11
Gh_A05G3185 GhOSCA2.8 Ah05 4 572 2 148 715 81 461.11 8.14 0.29 Plasma membrane 11
Gh_A06G1859 GhOSCA2.1 Ah06 1 977 1 197 398 45 096.6 8.6 0.218 Plasma membrane 4
Gh_A06G1983 GhOSCA3.3 Ah06 2 640 2 178 725 82 653.21 9.24 0.249 Plasma membrane 9
Gh_A07G1673 GhOSCA1.5 Ah07 6 194 2 307 768 88 108.01 8.96 0.189 Plasma membrane 8
Gh_A08G0402 GhOSCA1.10 Ah08 10 521 2 271 756 86 578.39 8.97 0.201 Plasma membrane 11
Gh_A08G1374 GhOSCA1.14 Ah08 3 247 1 836 611 70 529.57 9.2 −0.116 Plasma membrane 5
Gh_A10G0109 GhOSCA1.3 Ah10 4 272 2 319 772 87 912.93 9.01 0.162 Plasma membrane 9
Gh_A11G1108 GhOSCA1.12 Ah11 6 928 2 223 740 85 096.93 9.42 0.235 Plasma membrane 10
Gh_A11G1428 GhOSCA1.8 Ah11 3 463 2 370 789 89 986.06 9.17 0.193 Plasma membrane 9
Gh_A11G1585 GhOSCA4.1 Ah11 2 409 2 409 802 90 638.37 6.27 0.204 Plasma membrane 7
Gh_A12G1860 GhOSCA1.16 Ah12 5 926 2 427 808 93 172.78 9.27 0.088 Plasma membrane 8
Gh_A13G0690 GhOSCA2.10 Ah13 5 580 2 148 715 81 740.83 8.9 0.34 Plasma membrane 9
Gh_D01G1077 GhOSCA2.5 Dh01 7 701 2 448 815 92 658.29 9.14 0.142 Plasma membrane 9
Gh_D03G1219 GhOSCA2.3 Dh03 900 462 153 17 508.91 9.75 0.572 Plasma membrane 4
Gh_D04G0419 GhOSCA2.9 Dh04 4 534 2 034 677 76 933.92 7.5 0.349 Plasma membrane 10
Gh_D05G1651 GhOSCA1.2 Dh05 3 620 2 313 770 87 927.8 9.07 0.161 Plasma membrane 10
Gh_D05G2050 GhOSCA2.7 Dh05 5 563 2 202 733 84 190.8 9.17 0.241 Nucleus 11
Gh_D05G2673 GhOSCA2.12 Dh05 3 818 2 133 710 80 902.88 8.62 0.225 Plasma membrane 10
Gh_D05G3846 GhOSCA3.2 Dh05 3 276 2 178 725 82 107.23 9.22 0.287 Plasma membrane 10
Gh_D06G0222 GhOSCA2.2 Dh06 4 705 2 238 745 85 103.71 9.34 0.225 Plasma membrane 10
Gh_D06G1519 GhOSCA3.4 Dh06 2 650 2 178 725 82 484.13 9.27 0.279 Plasma membrane 9
Gh_D07G1882 GhOSCA1.6 Dh07 26 539 3 678 1 225 140 180.38 5.85 −0.089 Plasma membrane, 8
Gh_D08G0493 GhOSCA1.11 Dh08 7 065 2 271 756 86 657.45 9.04 0.194 Plasma membrane 11
Gh_D08G1669 GhOSCA1.15 Dh08 2 677 1 434 477 55 135.71 9.85 0.076 Plasma membrane 4
Gh_D10G0112 GhOSCA1.4 Dh10 4 346 2 319 772 87 760.73 8.95 0.168 Plasma membrane 9
Gh_D11G1258 GhOSCA1.13 Dh11 6 986 2 223 740 85 167.87 9.54 0.188 Plasma membrane 10
Gh_D11G1580 GhOSCA1.9 Dh11 3 466 2 376 791 90 268.5 9.1 0.194 Plasma membrane 9
Gh_D11G1742 GhOSCA4.2 Dh11 2 409 2 409 802 90 638.31 6.37 0.198 Plasma membrane 7
Gh_D12G2031 GhOSCA1.17 Dh12 5 816 2 424 807 92 955.59 9.4 0.077 Plasma membrane 8
Gh_D13G0811 GhOSCA2.11 Dh13 5 425 2 148 715 81 743.82 9.04 0.33 Plasma membrane 9
Gh_Sca144594G01 GhOSCA1.7 scaffold 300 300 99 11 379.51 7.79 0.706 Chloroplast 1
Gorai.001G128900.1 GrOSCA2.1 D501 2 178 1 064 102 11.711 10.688 0.587 Chloroplast 2
Gorai.001G215500.1 GrOSCA1.1 D501 7 158 3 080 768 87.993 8.988 0.18 Plasma membrane 8
Gorai.002G137000.1 GrOSCA2.2 D502 9 231 2 862 808 91.773 9.198 0.156 Plasma membrane 9
Gorai.004G055300.1 GrOSCA1.2 D504 5 021 2 362 586 67.115 9.246 0.244 Plasma membrane 9
Gorai.004G180800.1 GrOSCA1.3 D504 3 437 1 880 511 58.929 10.403 0.12 Plasma membrane 5
Gorai.007G134700.1 GrOSCA1.4 D507 7 654 2 816 740 85.254 9.888 0.183 Plasma membrane 10
Gorai.007G171500.1 GrOSCA1.5 D507 3 609 2 515 788 89.983 9.369 0.173 Plasma membrane 7
Gorai.007G191000.1 GrOSCA4.1 D507 2 968 2 968 802 90.652 6.976 0.196 Plasma membrane 7
Gorai.008G222200.1 GrOSCA1.6 D508 6 527 3 079 807 93.015 9.601 0.074 Plasma membrane 8
Gorai.009G152500.1 GrOSCA3.1 D509 3 843 2 747 725 82.092 9.592 0.288 Plasma membrane 10
Gorai.009G181100.1 GrOSCA1.7 D509 4 876 3 289 770 87.98 9.402 0.161 Plasma membrane 10
Gorai.009G222800.1 GrOSCA2.3 D509 6 645 3 428 734 84.307 9.457 0.234 Nucleus 11
Gorai.009G295700.1 GrOSCA2.4 D509 4 068 2 374 710 80.819 8.476 0.221 Plasma membrane 10
Gorai.010G028700.1 GrOSCA2.5 D510 4 907 2 778 758 86.464 9.306 0.25 Plasma membrane, 9
Gorai.010G051200.1 GrOSCA2.6 D510 1 914 893 105 11.8 9.562 0.35 Plasma membrane 1
Gorai.010G139200.1 GrOSCA2.7 D510 1 543 675 105 11.854 9.579 0.389 Plasma membrane, 1
Gorai.010G168400.1 GrOSCA3.2 D510 3 288 2 621 725 82.416 9.561 0.278 Plasma membrane, 9
Gorai.010G206800.1 GrOSCA2.8 D510 1 966 858 105 11.828 9.579 0.345 Plasma membrane 1
Gorai.011G012200.1 GrOSCA1.8 D511 5 358 3 017 772 87.761 9.275 0.167 Plasma membrane 9
Gorai.011G134200.1 GrOSCA2.9 D511 976 1 998 105 11.828 9.579 0.345 Plasma membrane 1
Gorai.012G051600.1 GrOSCA2.10 D512 5 526 2 745 715 81.339 8.538 0.297 Plasma membrane 11
Gorai.013G089300.1 GrOSCA2.11 D513 6 843 2 821 715 81.828 9.017 0.333 Plasma membrane 9
Cotton_A_27813 GaOSCA2.4 D510 5 108 2 247 748 85.668 9.42 0.168 Nucleus 10
Cotton_A_26870 GaOSCA3.1 D508 2 643 2 106 701 79.736 9.552 0.282 Plasma membrane 9
Cotton_A_26154 GaOSCA3.2 D510 3 290 2 178 725 82.116 9.547 0.291 Plasma membrane 10
Cotton_A_25263 GaOSCA2.2 D508 3 961 2 259 752 86.418 9.29 0.267 Plasma membrane 11
Cotton_A_22266 GaOSCA2.6 D510 2 580 357 118 13.129 4.672 0.07 Chloroplast 1
Cotton_A_22163 GaOSCA4.1 D504 2 999 2 999 802 90.667 6.782 0.208 Plasma membrane 7
Cotton_A_19862 GaOSCA2.3 A209 2 379 357 118 13.071 6.515 0.214 Chloroplast 1
Cotton_A_18702 GaOSCA1.1 A201 6 179 2 349 782 89.858 8.768 0.188 Plasma membrane 8
Cotton_A_18315 GaOSCA2.8 A212 5 664 3 237 715 81.423 8.041 0.302 Plasma membrane 11
Cotton_A_12285 GaOSCA1.4 A204 3 474 2 367 788 89.803 9.306 0.182 Plasma membrane 9
Cotton_A_08463 GaOSCA1.9 A212 11 662 4 659 1 552 177.449 7.745 −0.245 Plasma membrane 9
Cotton_A_08242 GaOSCA1.5 A204 6 890 2 223 740 85.169 9.769 0.223 Plasma membrane 10
Cotton_A_07948 GaOSCA1.6 A206 9 663 3 000 999 113.318 10.059 0.051 Plasma membrane 8
Cotton_A_04660 GaOSCA1.7 A210 3 655 2 313 770 87.917 9.57 0.163 Plasma membrane 10
Cotton_A_04078 GaOSCA2.7 A210 3 822 2 145 714 81.288 8.562 0.216 Plasma membrane 10
Cotton_A_03209 GaOSCA1.2 A203 7 085 2 271 756 86.574 9.222 0.203 Plasma membrane 11
Cotton_A_29061 GaOSCA2.1 A207 6 765 2 199 732 83.592 9.864 0.205 Plasma membrane 9
Cotton_A_29328 GaOSCA1.3 A203 4 128 2 418 805 92.665 9.643 0.066 Plasma membrane 7
Cotton_A_29852 GaOSCA1.8 A211 2 752 1 344 447 51.723 10.307 0.084 Plasma membrane 4
Cotton_A_40076 GaOSCA2.5 A210 6 579 3 296 715 81.868 9.017 0.33 Plasma membrane 9
Cotton_A_41040 GaOSCA2.9 scaffold 276 276 91 10.34 9.026 0.492 Chloroplast 1
  1. Note: CDS length: Coding sequence length, MW: Relative molecular mass, pI: Isoelectric point, GRAVY: Grand average of hydropathy, TM: Transmembrane domain