Skip to main content

Table 2 Physicochemical Properties of OSCA Gene

From: Genome-wide identification of OSCA gene family and their potential function in the regulation of dehydration and salt stress in Gossypium hirsutum

Gene ID

Gene name

Chro. No

Gene length/bp

CDS length/bp

No. of amino acids/aa

MW (kDa)

pI

GRAVY

Subcellular localization

TM

Gh_A01G1022

GhOSCA2.4

Ah01

7 612

2 427

808

91 824.27

9.12

0.155

Plasma membrane,

9

Gh_A05G1223

GhOSCA3.1

Ah05

3 281

2 178

725

82 096.29

9.22

0.292

Plasma membrane

10

Gh_A05G1480

GhOSCA1.1

Ah05

3 655

2 313

770

87 946.96

9.2

0.162

Plasma membrane

10

Gh_A05G1853

GhOSCA2.6

Ah05

5 707

2 235

744

85 367.08

9.36

0.213

Nucleus

11

Gh_A05G3185

GhOSCA2.8

Ah05

4 572

2 148

715

81 461.11

8.14

0.29

Plasma membrane

11

Gh_A06G1859

GhOSCA2.1

Ah06

1 977

1 197

398

45 096.6

8.6

0.218

Plasma membrane

4

Gh_A06G1983

GhOSCA3.3

Ah06

2 640

2 178

725

82 653.21

9.24

0.249

Plasma membrane

9

Gh_A07G1673

GhOSCA1.5

Ah07

6 194

2 307

768

88 108.01

8.96

0.189

Plasma membrane

8

Gh_A08G0402

GhOSCA1.10

Ah08

10 521

2 271

756

86 578.39

8.97

0.201

Plasma membrane

11

Gh_A08G1374

GhOSCA1.14

Ah08

3 247

1 836

611

70 529.57

9.2

−0.116

Plasma membrane

5

Gh_A10G0109

GhOSCA1.3

Ah10

4 272

2 319

772

87 912.93

9.01

0.162

Plasma membrane

9

Gh_A11G1108

GhOSCA1.12

Ah11

6 928

2 223

740

85 096.93

9.42

0.235

Plasma membrane

10

Gh_A11G1428

GhOSCA1.8

Ah11

3 463

2 370

789

89 986.06

9.17

0.193

Plasma membrane

9

Gh_A11G1585

GhOSCA4.1

Ah11

2 409

2 409

802

90 638.37

6.27

0.204

Plasma membrane

7

Gh_A12G1860

GhOSCA1.16

Ah12

5 926

2 427

808

93 172.78

9.27

0.088

Plasma membrane

8

Gh_A13G0690

GhOSCA2.10

Ah13

5 580

2 148

715

81 740.83

8.9

0.34

Plasma membrane

9

Gh_D01G1077

GhOSCA2.5

Dh01

7 701

2 448

815

92 658.29

9.14

0.142

Plasma membrane

9

Gh_D03G1219

GhOSCA2.3

Dh03

900

462

153

17 508.91

9.75

0.572

Plasma membrane

4

Gh_D04G0419

GhOSCA2.9

Dh04

4 534

2 034

677

76 933.92

7.5

0.349

Plasma membrane

10

Gh_D05G1651

GhOSCA1.2

Dh05

3 620

2 313

770

87 927.8

9.07

0.161

Plasma membrane

10

Gh_D05G2050

GhOSCA2.7

Dh05

5 563

2 202

733

84 190.8

9.17

0.241

Nucleus

11

Gh_D05G2673

GhOSCA2.12

Dh05

3 818

2 133

710

80 902.88

8.62

0.225

Plasma membrane

10

Gh_D05G3846

GhOSCA3.2

Dh05

3 276

2 178

725

82 107.23

9.22

0.287

Plasma membrane

10

Gh_D06G0222

GhOSCA2.2

Dh06

4 705

2 238

745

85 103.71

9.34

0.225

Plasma membrane

10

Gh_D06G1519

GhOSCA3.4

Dh06

2 650

2 178

725

82 484.13

9.27

0.279

Plasma membrane

9

Gh_D07G1882

GhOSCA1.6

Dh07

26 539

3 678

1 225

140 180.38

5.85

−0.089

Plasma membrane,

8

Gh_D08G0493

GhOSCA1.11

Dh08

7 065

2 271

756

86 657.45

9.04

0.194

Plasma membrane

11

Gh_D08G1669

GhOSCA1.15

Dh08

2 677

1 434

477

55 135.71

9.85

0.076

Plasma membrane

4

Gh_D10G0112

GhOSCA1.4

Dh10

4 346

2 319

772

87 760.73

8.95

0.168

Plasma membrane

9

Gh_D11G1258

GhOSCA1.13

Dh11

6 986

2 223

740

85 167.87

9.54

0.188

Plasma membrane

10

Gh_D11G1580

GhOSCA1.9

Dh11

3 466

2 376

791

90 268.5

9.1

0.194

Plasma membrane

9

Gh_D11G1742

GhOSCA4.2

Dh11

2 409

2 409

802

90 638.31

6.37

0.198

Plasma membrane

7

Gh_D12G2031

GhOSCA1.17

Dh12

5 816

2 424

807

92 955.59

9.4

0.077

Plasma membrane

8

Gh_D13G0811

GhOSCA2.11

Dh13

5 425

2 148

715

81 743.82

9.04

0.33

Plasma membrane

9

Gh_Sca144594G01

GhOSCA1.7

scaffold

300

300

99

11 379.51

7.79

0.706

Chloroplast

1

Gorai.001G128900.1

GrOSCA2.1

D501

2 178

1 064

102

11.711

10.688

0.587

Chloroplast

2

Gorai.001G215500.1

GrOSCA1.1

D501

7 158

3 080

768

87.993

8.988

0.18

Plasma membrane

8

Gorai.002G137000.1

GrOSCA2.2

D502

9 231

2 862

808

91.773

9.198

0.156

Plasma membrane

9

Gorai.004G055300.1

GrOSCA1.2

D504

5 021

2 362

586

67.115

9.246

0.244

Plasma membrane

9

Gorai.004G180800.1

GrOSCA1.3

D504

3 437

1 880

511

58.929

10.403

0.12

Plasma membrane

5

Gorai.007G134700.1

GrOSCA1.4

D507

7 654

2 816

740

85.254

9.888

0.183

Plasma membrane

10

Gorai.007G171500.1

GrOSCA1.5

D507

3 609

2 515

788

89.983

9.369

0.173

Plasma membrane

7

Gorai.007G191000.1

GrOSCA4.1

D507

2 968

2 968

802

90.652

6.976

0.196

Plasma membrane

7

Gorai.008G222200.1

GrOSCA1.6

D508

6 527

3 079

807

93.015

9.601

0.074

Plasma membrane

8

Gorai.009G152500.1

GrOSCA3.1

D509

3 843

2 747

725

82.092

9.592

0.288

Plasma membrane

10

Gorai.009G181100.1

GrOSCA1.7

D509

4 876

3 289

770

87.98

9.402

0.161

Plasma membrane

10

Gorai.009G222800.1

GrOSCA2.3

D509

6 645

3 428

734

84.307

9.457

0.234

Nucleus

11

Gorai.009G295700.1

GrOSCA2.4

D509

4 068

2 374

710

80.819

8.476

0.221

Plasma membrane

10

Gorai.010G028700.1

GrOSCA2.5

D510

4 907

2 778

758

86.464

9.306

0.25

Plasma membrane,

9

Gorai.010G051200.1

GrOSCA2.6

D510

1 914

893

105

11.8

9.562

0.35

Plasma membrane

1

Gorai.010G139200.1

GrOSCA2.7

D510

1 543

675

105

11.854

9.579

0.389

Plasma membrane,

1

Gorai.010G168400.1

GrOSCA3.2

D510

3 288

2 621

725

82.416

9.561

0.278

Plasma membrane,

9

Gorai.010G206800.1

GrOSCA2.8

D510

1 966

858

105

11.828

9.579

0.345

Plasma membrane

1

Gorai.011G012200.1

GrOSCA1.8

D511

5 358

3 017

772

87.761

9.275

0.167

Plasma membrane

9

Gorai.011G134200.1

GrOSCA2.9

D511

976

1 998

105

11.828

9.579

0.345

Plasma membrane

1

Gorai.012G051600.1

GrOSCA2.10

D512

5 526

2 745

715

81.339

8.538

0.297

Plasma membrane

11

Gorai.013G089300.1

GrOSCA2.11

D513

6 843

2 821

715

81.828

9.017

0.333

Plasma membrane

9

Cotton_A_27813

GaOSCA2.4

D510

5 108

2 247

748

85.668

9.42

0.168

Nucleus

10

Cotton_A_26870

GaOSCA3.1

D508

2 643

2 106

701

79.736

9.552

0.282

Plasma membrane

9

Cotton_A_26154

GaOSCA3.2

D510

3 290

2 178

725

82.116

9.547

0.291

Plasma membrane

10

Cotton_A_25263

GaOSCA2.2

D508

3 961

2 259

752

86.418

9.29

0.267

Plasma membrane

11

Cotton_A_22266

GaOSCA2.6

D510

2 580

357

118

13.129

4.672

0.07

Chloroplast

1

Cotton_A_22163

GaOSCA4.1

D504

2 999

2 999

802

90.667

6.782

0.208

Plasma membrane

7

Cotton_A_19862

GaOSCA2.3

A209

2 379

357

118

13.071

6.515

0.214

Chloroplast

1

Cotton_A_18702

GaOSCA1.1

A201

6 179

2 349

782

89.858

8.768

0.188

Plasma membrane

8

Cotton_A_18315

GaOSCA2.8

A212

5 664

3 237

715

81.423

8.041

0.302

Plasma membrane

11

Cotton_A_12285

GaOSCA1.4

A204

3 474

2 367

788

89.803

9.306

0.182

Plasma membrane

9

Cotton_A_08463

GaOSCA1.9

A212

11 662

4 659

1 552

177.449

7.745

−0.245

Plasma membrane

9

Cotton_A_08242

GaOSCA1.5

A204

6 890

2 223

740

85.169

9.769

0.223

Plasma membrane

10

Cotton_A_07948

GaOSCA1.6

A206

9 663

3 000

999

113.318

10.059

0.051

Plasma membrane

8

Cotton_A_04660

GaOSCA1.7

A210

3 655

2 313

770

87.917

9.57

0.163

Plasma membrane

10

Cotton_A_04078

GaOSCA2.7

A210

3 822

2 145

714

81.288

8.562

0.216

Plasma membrane

10

Cotton_A_03209

GaOSCA1.2

A203

7 085

2 271

756

86.574

9.222

0.203

Plasma membrane

11

Cotton_A_29061

GaOSCA2.1

A207

6 765

2 199

732

83.592

9.864

0.205

Plasma membrane

9

Cotton_A_29328

GaOSCA1.3

A203

4 128

2 418

805

92.665

9.643

0.066

Plasma membrane

7

Cotton_A_29852

GaOSCA1.8

A211

2 752

1 344

447

51.723

10.307

0.084

Plasma membrane

4

Cotton_A_40076

GaOSCA2.5

A210

6 579

3 296

715

81.868

9.017

0.33

Plasma membrane

9

Cotton_A_41040

GaOSCA2.9

scaffold

276

276

91

10.34

9.026

0.492

Chloroplast

1

  1. Note: CDS length: Coding sequence length, MW: Relative molecular mass, pI: Isoelectric point, GRAVY: Grand average of hydropathy, TM: Transmembrane domain
Back to article page

Journal of Cotton Research

ISSN: 2523-3254

Contact us